Transcript: ENST00000485975.1 CARD9-007

Description

caspase recruitment domain family, member 9 [Source:HGNC Symbol;Acc:16391]

Gene Synonyms

C9orf151, CANDF2, HEP, HEP1, TIMM15, ZIM17, bA413M3.2, hCARD9

Location

Chromosome 9: 139,258,409-139,265,345 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 4532 variant alleles and maps to 606 oligo probes.

Gene

This transcript is a product of gene ENSG00000187796.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371732.5	CARD9-004	2123	536aa	ENSP00000360797.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6997	Q9H257	NM_052813.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371734.3	CARD9-001	1814	492aa	ENSP00000360799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48057	Q9H257	NM_052814.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315908.7	CARD9-201	1267	366aa	ENSP00000323719.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H257	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489932.2	CARD9-002	1912	366aa	ENSP00000451368.1	Nonsense mediated decay		Q9H257	-	-
ENST00000460290.1	CARD9-003	1061	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485975.1	CARD9-007	4574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481053.1	CARD9-005	4060	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556340.1	CARD9-008	1005	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 4,574 bps,

Version

ENST00000485975.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351709 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000485975.1 CARD9-007

Summary