Transcript: ENST00000339994.4 KCNJ11-001

Description

potassium inwardly-rectifying channel, subfamily J, member 11 [Source:HGNC Symbol;Acc:6257]

Gene Synonyms

BIR, HHF2, IKATP, KIR6.2, Kir6.2, PHHI, TNDM3

Location

About this transcript

This transcript has 1 exon, is annotated with 24 domains and features, is associated with 1854 variant alleles and maps to 324 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000339994.4	KCNJ11-001	2801	390aa	ENSP00000345708.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31436	B2RC52 E9PPF1 Q14654	NM_000525.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528731.1	KCNJ11-002	2146	303aa	ENSP00000434755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53606	E9PPF1 Q14654	NM_001166290.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526912.1	KCNJ11-003	781	153aa	ENSP00000432729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPF1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528992.1	KCNJ11-004	466	155aa	ENSP00000436479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000526747.1	KCNJ11-005	418	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,801 bps, Translation length: 390 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14654

CCDS

This transcript is a member of the Human CCDS set: CCDS31436

Version

ENST00000339994.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387037 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.