Transcript: ENST00000470594.1 MAGED4B-001

Description

melanoma antigen family D, 4B [Source:HGNC Symbol;Acc:22880]

Gene Synonyms

KIAA1859, MAGE-E1, MAGE1, MAGED4A, MAGEE1

Location

Chromosome X: 51,804,923-51,812,278 reverse strand.

About this transcript

This transcript has 12 exons, is associated with 32 variant alleles and maps to 1149 oligo probes.

Gene

This transcript is a product of gene ENSG00000187243.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000431659.1	MAGED4B-201	2650	757aa	ENSP00000395962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56602	Q96JG8	NM_001242362.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485287.1	MAGED4B-003	2618	757aa	ENSP00000421861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56602	Q96JG8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335504.5	MAGED4B-004	2578	741aa	ENSP00000335385.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14338	Q96JG8	NM_177537.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360134.6	MAGED4B-010	2510	739aa	ENSP00000353252.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35281	Q96JG8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497164.1	MAGED4B-011	2482	741aa	ENSP00000423848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14338	Q96JG8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486010.1	MAGED4B-007	889	271aa	ENSP00000423971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000490581.2	MAGED4B-012	917	33aa	ENSP00000422913.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481193.2	MAGED4B-013	534	48aa	ENSP00000422633.1	Nonsense mediated decay		H0Y8Z3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486469.1	MAGED4B-008	483	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471617.1	MAGED4B-006	448	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481096.2	MAGED4B-002	3230	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470594.1	MAGED4B-001	2995	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514560.1	MAGED4B-014	510	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 2,995 bps,

Version

ENST00000470594.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000056605 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000470594.1 MAGED4B-001

Summary