Transcript: ENST00000477679.1 ESPN-003

Description

espin [Source:HGNC Symbol;Acc:13281]

Gene Synonyms

DFNB36

Location

Chromosome 1: 6,511,777-6,520,471 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4691 variant alleles and maps to 356 oligo probes.

Gene

This transcript is a product of gene ENSG00000187017.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377828.1	ESPN-001	3531	854aa	ENSP00000367059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS70	B1AK53	NM_031475.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461727.1	ESPN-009	1869	288aa	ENSP00000465308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AK53 K7EMB7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416731.1	ESPN-201	1665	288aa	ENSP00000399239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AK53 K7EMB7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434576.1	ESPN-007	750	188aa	ENSP00000413621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418286.1	ESPN-002	641	213aa	ENSP00000401793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYL1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000478323.1	ESPN-005	270	28aa	ENSP00000466437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMB7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475228.1	ESPN-004	813	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468561.1	ESPN-008	664	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475479.1	ESPN-006	360	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477679.1	ESPN-003	885	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 885 bps,

Version

ENST00000477679.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000001933 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000477679.1 ESPN-003

Summary