Transcript: ENST00000335390.5 TMEM17-001

Description

transmembrane protein 17 [Source:HGNC Symbol;Acc:26623]

Gene Synonyms

FLJ34583

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 2881 variant alleles and maps to 280 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335390.5	TMEM17-001	1797	198aa	ENSP00000335094.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1871	Q86X19	NM_198276.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494919.1	TMEM17-003	2460	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479763.1	TMEM17-002	2136	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,797 bps, Translation length: 198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86X19

CCDS

This transcript is a member of the Human CCDS set: CCDS1871

Version

ENST00000335390.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251618 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.