Transcript: ENST00000379236.3 TNFRSF4-001

Description

tumor necrosis factor receptor superfamily, member 4 [Source:HGNC Symbol;Acc:11918]

Gene Synonyms

ACT35, CD134, OX40, TXGP1L

Location

About this transcript

This transcript has 7 exons, is annotated with 24 domains and features, is associated with 2049 variant alleles and maps to 338 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379236.3	TNFRSF4-001	1068	277aa	ENSP00000368538.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11	P43489	NM_003327.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453580.1	TNFRSF4-003	393	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497869.1	TNFRSF4-002	1707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,068 bps, Translation length: 277 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43489

CCDS

This transcript is a member of the Human CCDS set: CCDS11

Version

ENST00000379236.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000004086 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.