Transcript: ENST00000592424.1 CYP4F3-007

Description

cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:HGNC Symbol;Acc:2646]

Gene Synonyms

CPF3, CYP4F, LTB4H

Location

Chromosome 19: 15,760,790-15,769,126 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 5408 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000186529.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221307.8	CYP4F3-001	5050	520aa	ENSP00000221307.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12332	B7Z5A8 Q08477	NM_000896.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591058.1	CYP4F3-002	2983	520aa	ENSP00000466988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59362	Q08477	NM_001199208.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586182.2	CYP4F3-004	2338	520aa	ENSP00000466395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59362	Q08477	NM_001199209.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585846.1	CYP4F3-005	2056	520aa	ENSP00000468105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59362	Q08477	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592424.1	CYP4F3-007	561	74aa	ENSP00000476546.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587360.1	CYP4F3-006	559	79aa	ENSP00000465394.1	Nonsense mediated decay		K7EJZ8	-	-
ENST00000588886.2	CYP4F3-008	375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592279.2	CYP4F3-003	2078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000609670.1	CYP4F3-009	337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 561 bps, Translation length: 74 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000592424.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460914 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000592424.1 CYP4F3-007

Summary