Transcript: ENST00000518617.1 SLC36A2-002

Description

solute carrier family 36 (proton/amino acid symporter), member 2 [Source:HGNC Symbol;Acc:18762]

Gene Synonyms

PAT2, TRAMD1, tramdorin

Location

Chromosome 5: 150,695,754-150,727,089 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 4 domains and features, is associated with 14097 variant alleles and maps to 363 oligo probes.

Gene

This transcript is a product of gene ENSG00000186335.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335244.4	SLC36A2-001	3421	483aa	ENSP00000334223.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4315	E5RGH8 Q495M3	NM_181776.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450886.1	SLC36A2-201	2459	207aa	ENSP00000399479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q495M3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521967.1	SLC36A2-004	1471	395aa	ENSP00000430535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGH8 E5RJJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523044.1	SLC36A2-005	403	107aa	ENSP00000428634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518617.1	SLC36A2-002	2156	147aa	ENSP00000430149.1	Nonsense mediated decay		E5RGH8	-	-
ENST00000518280.1	SLC36A2-006	2059	147aa	ENSP00000428453.1	Nonsense mediated decay		E5RGH8	-	-
ENST00000522829.1	SLC36A2-003	1068	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 5, Transcript length: 2,156 bps, Translation length: 147 residues

Version

ENST00000518617.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373818 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000518617.1 SLC36A2-002

Summary