Transcript: ENST00000530047.1 SLC52A2-002

Description

solute carrier family 52 (riboflavin transporter), member 2 [Source:HGNC Symbol;Acc:30224]

Gene Synonyms

BVVLS2, D15Ertd747e, FLJ11856, GPCR41, GPR172A, PAR1, RFT3, RFVT2, hRFT3

Location

Chromosome 8: 145,582,217-145,584,930 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 2093 variant alleles and maps to 335 oligo probes.

Gene

This transcript is a product of gene ENSG00000185803.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000532887.1	SLC52A2-004	2147	445aa	ENSP00000436768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6423	E9PIX2 E9PRC3 F5GXA8 Q9HAB3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000329994.2	SLC52A2-001	1896	445aa	ENSP00000333638.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6423	E9PIX2 E9PRC3 F5GXA8 Q9HAB3	NM_024531.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527078.1	SLC52A2-009	1790	445aa	ENSP00000434728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6423	E9PIX2 E9PRC3 F5GXA8 Q9HAB3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402965.1	SLC52A2-003	1777	445aa	ENSP00000385961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6423	E9PIX2 E9PRC3 F5GXA8 Q9HAB3	NM_001253815.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530047.1	SLC52A2-002	1757	445aa	ENSP00000435820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6423	E9PIX2 E9PRC3 F5GXA8 Q9HAB3	NM_001253816.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540505.1	SLC52A2-201	1676	357aa	ENSP00000440400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXA8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534725.1	SLC52A2-005	935	172aa	ENSP00000431965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIX2 E9PRC3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526752.1	SLC52A2-012	710	111aa	ENSP00000433796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJC1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526338.1	SLC52A2-011	655	170aa	ENSP00000433583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKE4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524541.1	SLC52A2-010	495	69aa	ENSP00000434239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRC3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526779.1	SLC52A2-008	881	87aa	ENSP00000436917.1	Nonsense mediated decay		E9PPS0 E9PRC3	-	-
ENST00000526891.1	SLC52A2-013	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532815.1	SLC52A2-006	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533662.1	SLC52A2-007	1106	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,757 bps, Translation length: 445 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HAB3

CCDS

This transcript is a member of the Human CCDS set: CCDS6423

Version

ENST00000530047.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382400 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000530047.1 SLC52A2-002

Summary