Transcript: ENST00000340647.4 BRCC3-006

Description

BRCA1/BRCA2-containing complex, subunit 3 [Source:HGNC Symbol;Acc:24185]

Gene Synonyms

BRCC36, C6.1A, CXorf53

Location

Chromosome X: 154,299,695-154,349,593 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 13814 variant alleles and maps to 339 oligo probes.

Gene

This transcript is a product of gene ENSG00000185515.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369462.1	BRCC3-001	2846	316aa	ENSP00000358474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56611	P46736	NM_024332.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369459.2	BRCC3-004	2641	247aa	ENSP00000358471.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P46736	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330045.7	BRCC3-002	2496	291aa	ENSP00000328641.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56612	P46736	NM_001242640.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340647.4	BRCC3-006	1101	292aa	ENSP00000344103.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56610	P46736	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399042.1	BRCC3-201	954	317aa	ENSP00000381998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H9KVA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411985.1	BRCC3-007	688	226aa	ENSP00000413170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000399026.1	BRCC3-003	456	90aa	ENSP00000381988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000453705.1	BRCC3-005	2694	85aa	ENSP00000415152.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,101 bps, Translation length: 292 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P46736

CCDS

This transcript is a member of the Human CCDS set: CCDS56610

Version

ENST00000340647.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316164 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340647.4 BRCC3-006

Summary