Transcript: ENST00000327787.8 C17orf70-001

Description

chromosome 17 open reading frame 70 [Source:HGNC Symbol;Acc:26171]

Gene Synonyms

FAAP100, FLJ22175

Location

Chromosome 17: 79,506,911-79,519,403 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 8001 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000185504.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000537152.1	C17orf70-201	3652	730aa	ENSP00000440151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZS4 F5H095 Q0VG06	NM_025161.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000327787.8	C17orf70-001	3627	881aa	ENSP00000333283.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32765	F5GZS4 F5H095 J3KQD8 Q0VG06	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425898.2	C17orf70-004	2996	530aa	ENSP00000399674.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVV8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541246.1	C17orf70-008	1101	300aa	ENSP00000438149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZS4 F5H095	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544302.1	C17orf70-007	1091	249aa	ENSP00000444241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZS4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536161.1	C17orf70-006	924	172aa	ENSP00000443415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5G6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000443656.2	C17orf70-002	3822	97aa	ENSP00000395348.2	Nonsense mediated decay		J3KQD8	-	-
ENST00000545865.1	C17orf70-005	689	110aa	ENSP00000459776.1	Nonsense mediated decay		I3L2L9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,627 bps, Translation length: 881 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q0VG06

CCDS

This transcript is a member of the Human CCDS set: CCDS32765

Version

ENST00000327787.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000396170 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000327787.8 C17orf70-001

Summary