Transcript: ENST00000554003.1 STAC3-007

Description

SH3 and cysteine rich domain 3 [Source:HGNC Symbol;Acc:28423]

Gene Synonyms

MGC2793, NAM

Location

Chromosome 12: 57,638,540-57,642,147 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1891 variant alleles and maps to 181 oligo probes.

Gene

This transcript is a product of gene ENSG00000185482.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000332782.2	STAC3-001	1656	364aa	ENSP00000329200.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8936	B4DUK9 G3V5D4 Q96MF2	NM_145064.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554578.1	STAC3-003	1580	325aa	ENSP00000452068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66406	B4DUK9 Q96MF2	NM_001286256.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546246.2	STAC3-004	1014	178aa	ENSP00000441515.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66405	B4DUK9	NM_001286257.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553489.1	STAC3-005	795	168aa	ENSP00000452299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5D4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557176.1	STAC3-002	1143	104aa	ENSP00000450740.1	Nonsense mediated decay		G3V2L9	-	-
ENST00000554003.1	STAC3-007	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553294.1	STAC3-006	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 613 bps,

Version

ENST00000554003.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412731 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000554003.1 STAC3-007

Summary