Transcript: ENST00000440288.2 SH3BGR-005

Description

SH3 domain binding glutamic acid-rich protein [Source:HGNC Symbol;Acc:10822]

Gene Synonyms

21-GARP

Location

Chromosome 21: 40,817,857-40,883,633 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 27030 variant alleles and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSG00000185437.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333634.4	SH3BGR-001	1251	239aa	ENSP00000332513.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13666	C9JX40 P55822	NM_007341.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380637.3	SH3BGR-002	1014	128aa	ENSP00000370011.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33560	C9JX40 P55822	NM_001001713.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452550.1	SH3BGR-008	865	137aa	ENSP00000405675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJT2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000380634.1	SH3BGR-007	816	128aa	ENSP00000370008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33560	C9JX40 P55822	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458295.1	SH3BGR-004	812	97aa	ENSP00000404980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJT2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380631.1	SH3BGR-006	780	128aa	ENSP00000370005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33560	C9JX40 P55822	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440288.2	SH3BGR-005	585	106aa	ENSP00000401572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JX40	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447939.1	SH3BGR-009	512	54aa	ENSP00000403115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1Y8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000423596.1	SH3BGR-010	246	81aa	ENSP00000413981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3V3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 585 bps, Translation length: 106 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000440288.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000157381 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000440288.2 SH3BGR-005

Summary