Transcript: ENST00000479615.1 PARK2-007

Description

parkin RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:8607]

Gene Synonyms

AR-JP, LPRS2, PDJ, PRKN, parkin

Location

Chromosome 6: 161,771,131-163,148,700 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 637864 variant alleles and maps to 265 oligo probes.

Gene

This transcript is a product of gene ENSG00000185345.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366898.1	PARK2-004	4180	465aa	ENSP00000355865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5281	M4T2U2 O60260 Q5XNR7 Q6Q2I8 Q6S8G7	NM_004562.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366897.1	PARK2-005	2877	437aa	ENSP00000355863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5282	M4T2U2 O60260 Q5VVX4 Q5XNR7 Q6Q2I8 Q6S8G7 S4X465	NM_013987.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366896.1	PARK2-006	2514	316aa	ENSP00000355862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5283	M4T2U2 O60260 Q6Q2I8	NM_013988.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366892.1	PARK2-002	1505	368aa	ENSP00000355858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKC3 Q5XNR7 Q6Q2I8 Q6S8G7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338468.3	PARK2-003	1276	274aa	ENSP00000343589.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M4T2U2 O60260 Q6Q2I8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366894.1	PARK2-001	1157	274aa	ENSP00000355860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M4T2U2 O60260 Q6Q2I8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479615.1	PARK2-007	904	218aa	ENSP00000434414.1	Nonsense mediated decay		O60260 Q6Q2I8 Q6S8G7	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 904 bps, Translation length: 218 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60260

Version

ENST00000479615.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000042998 (version 4)

Favourite species

All species

Recent locations

Transcript: ENST00000479615.1 PARK2-007

Summary