Transcript: ENST00000330342.3 ATP6V0A2-001

Description

ATPase, H+ transporting, lysosomal V0 subunit a2 [Source:HGNC Symbol;Acc:18481]

Gene Synonyms

A2, ARCL, ARCL2A, ATP6A2, ATP6N1D, ATP6a2, J6B7, RTF, STV1, Stv1, TJ6, TJ6M, TJ6S, TJ6s, VPH1, Vph1, WSS, a2

Location

Chromosome 12: 124,196,865-124,246,302 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 15 domains and features, is associated with 21562 variant alleles and maps to 780 oligo probes.

Gene

This transcript is a product of gene ENSG00000185344.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330342.3	ATP6V0A2-001	6542	856aa	ENSP00000332247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9254	B4DQF7 F5H5F3 F5H847 Q9Y487	NM_012463.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504192.2	ATP6V0A2-003	2525	328aa	ENSP00000443441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5F3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534943.1	ATP6V0A2-006	1733	131aa	ENSP00000443726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H847	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544833.1	ATP6V0A2-007	1013	138aa	ENSP00000441143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GX48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543687.1	ATP6V0A2-008	1421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536426.1	ATP6V0A2-005	742	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545059.1	ATP6V0A2-004	4232	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540368.1	ATP6V0A2-002	1479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 6,542 bps, Translation length: 856 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y487

CCDS

This transcript is a member of the Human CCDS set: CCDS9254

Version

ENST00000330342.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000400765 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000330342.3 ATP6V0A2-001

Summary