Transcript: ENST00000333538.5 WBSCR17-001

Description

Williams-Beuren syndrome chromosome region 17 [Source:HGNC Symbol;Acc:16347]

Gene Synonyms

GALNACT17, GALNT16, GALNT20, GALNTL3, GalNAc-T17

Location

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 266910 variant alleles and maps to 496 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333538.5	WBSCR17-001	3884	598aa	ENSP00000329654.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5540	B3KRD2 Q2L4S5 Q68CW8 Q6IS24	NM_022479.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447516.1	WBSCR17-004	566	188aa	ENSP00000392019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZX9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000498380.2	WBSCR17-003	3653	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467723.1	WBSCR17-002	3183	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,884 bps, Translation length: 598 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6IS24

CCDS

This transcript is a member of the Human CCDS set: CCDS5540

Version

ENST00000333538.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252006 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.