Transcript: ENST00000328024.6 RAB11B-001

Description

RAB11B, member RAS oncogene family [Source:HGNC Symbol;Acc:9761]

Gene Synonyms

H-YPT3, YPT3

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 7373 variant alleles and maps to 536 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328024.6	RAB11B-001	1751	218aa	ENSP00000333547.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12201	M0R377 Q15907	NM_004218.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594216.1	RAB11B-002	894	179aa	ENSP00000471148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DMK0 M0R2D0 M0R377	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601897.1	RAB11B-005	577	60aa	ENSP00000472473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2D0 M0R377	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600719.1	RAB11B-004	532	46aa	ENSP00000473042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R377	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000598706.1	RAB11B-003	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,751 bps, Translation length: 218 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15907

CCDS

This transcript is a member of the Human CCDS set: CCDS12201

Version

ENST00000328024.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000460343 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.