Transcript: ENST00000399817.4 IFITM2-001

Description

interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:5413]

Gene Synonyms

1-8D, DSPA2c

Location

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 835 variant alleles and maps to 373 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399817.4	IFITM2-001	659	132aa	ENSP00000382714.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41583	E9PQN9 Q01629	NM_006435.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602569.1	IFITM2-005	605	112aa	ENSP00000473587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQN9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533141.1	IFITM2-003	588	112aa	ENSP00000434443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQN9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399815.2	IFITM2-004	382	74aa	ENSP00000382712.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527146.1	IFITM2-002	634	55aa	ENSP00000431850.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 659 bps, Translation length: 132 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01629

CCDS

This transcript is a member of the Human CCDS set: CCDS41583

Version

ENST00000399817.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000383591 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.