Transcript: ENST00000412157.2 SNRNP35-002

Description

small nuclear ribonucleoprotein 35kDa (U11/U12) [Source:HGNC Symbol;Acc:30852]

Gene Synonyms

HM-1, HM1, U1SNRNPBP

Location

About this transcript

This transcript has 2 exons, is annotated with 10 domains and features, is associated with 3242 variant alleles and maps to 343 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000526639.2	SNRNP35-001	1975	246aa	ENSP00000432595.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9249	Q16560	NM_022717.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412157.2	SNRNP35-002	1140	251aa	ENSP00000403310.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45005	Q16560	NM_180699.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350887.5	SNRNP35-003	942	246aa	ENSP00000340774.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9249	Q16560	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527158.2	SNRNP35-004	2161	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529201.1	SNRNP35-007	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529904.2	SNRNP35-005	382	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,140 bps, Translation length: 251 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16560

CCDS

This transcript is a member of the Human CCDS set: CCDS45005

Version

ENST00000412157.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395201 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.