Transcript: ENST00000439209.1 LRTOMT-002

Description

leucine rich transmembrane and O-methyltransferase domain containing [Source:HGNC Symbol;Acc:25033]

Gene Synonyms

COMT2, DFNB63, LRRC51, TOMT

Location

Chromosome 11: 71,791,905-71,819,848 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 12075 variant alleles and maps to 208 oligo probes.

Gene

This transcript is a product of gene ENSG00000184154.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000435085.1	LRTOMT-203	3822	291aa	ENSP00000409789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44668	Q8WZ04	NM_001145309.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419228.1	LRTOMT-202	3705	251aa	ENSP00000392233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8WZ04	NM_001145310.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307198.7	LRTOMT-201	3601	291aa	ENSP00000305742.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44668	Q8WZ04	NM_001145308.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324866.7	LRTOMT-006	2402	146aa	ENSP00000440693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59227	F5GYI0 F5H0M6 Q96E66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000289488.2	LRTOMT-001	2332	192aa	ENSP00000289488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8208	B0AZV1 F5GYI0 F5H0M6 Q96E66	NM_145309.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423494.2	LRTOMT-003	1270	174aa	ENSP00000441249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55778	B0AZV1 Q96E66	NM_001205138.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447974.1	LRTOMT-204	983	158aa	ENSP00000414271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44667	F5GYI0 F5H0M6 Q96E66	NM_001145307.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538413.1	LRTOMT-011	842	92aa	ENSP00000438762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0M6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538478.1	LRTOMT-014	814	192aa	ENSP00000444583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8208	B0AZV1 F5GYI0 F5H0M6 Q96E66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439209.1	LRTOMT-002	801	156aa	ENSP00000395139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDG7 F5GYI0 F5H0M6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541614.1	LRTOMT-010	726	158aa	ENSP00000438522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44667	F5GYI0 F5H0M6 Q96E66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536917.1	LRTOMT-016	579	146aa	ENSP00000443421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59227	F5GYI0 F5H0M6 Q96E66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539271.1	LRTOMT-012	570	43aa	ENSP00000442267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6F7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542846.1	LRTOMT-015	527	103aa	ENSP00000440248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYI0 F5H0M6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539587.1	LRTOMT-004	428	43aa	ENSP00000437649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6F7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537483.1	LRTOMT-018	308	65aa	ENSP00000437985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H614	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440313.2	LRTOMT-020	253	47aa	ENSP00000390485.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WBA5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427369.2	LRTOMT-008	3299	227aa	ENSP00000409403.2	Nonsense mediated decay		F5GYI0 F5H0M6 Q96E66	-	-
ENST00000544409.1	LRTOMT-007	3182	187aa	ENSP00000440969.1	Nonsense mediated decay		F5GYI0 F5H0M6 Q96E66	-	-
ENST00000535883.1	LRTOMT-009	1263	38aa	ENSP00000437561.1	Nonsense mediated decay		F5H6K5	-	-
ENST00000412777.2	LRTOMT-013	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541899.1	LRTOMT-019	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 801 bps, Translation length: 156 residues

Version

ENST00000439209.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337505 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000439209.1 LRTOMT-002

Summary