Transcript: ENST00000529661.1 C11orf88-003

Description

chromosome 11 open reading frame 88 [Source:HGNC Symbol;Acc:25061]

Gene Synonyms

FLJ46266

Location

About this transcript

This transcript has 5 exons, is associated with 7637 variant alleles and maps to 172 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000529167.1	C11orf88-002	3099	178aa	ENSP00000432911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PN74	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000332814.6	C11orf88-004	795	196aa	ENSP00000333845.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41712	E9PN74 Q6PI97	NM_207430.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375618.4	C11orf88-001	712	169aa	ENSP00000364768.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41713	Q6PI97	NM_001100388.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529661.1	C11orf88-003	624	29aa	ENSP00000435029.1	Nonsense mediated decay		H0YE60	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 624 bps, Translation length: 29 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000529661.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000391184 (version 1)