Transcript: ENST00000341421.3 TRAK1-002

Description

trafficking protein, kinesin binding 1 [Source:HGNC Symbol;Acc:29947]

Gene Synonyms

KIAA1042, MILT1, OIP106

Location

Chromosome 3: 42,201,661-42,254,115 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 23022 variant alleles and maps to 636 oligo probes.

Gene

This transcript is a product of gene ENSG00000182606.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327628.5	TRAK1-004	5293	953aa	ENSP00000328998.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43072	Q9UPV9	NM_001042646.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396175.1	TRAK1-001	5033	895aa	ENSP00000379478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC32	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341421.3	TRAK1-002	4620	686aa	ENSP00000340702.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2695	J3KNT7	NM_014965.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449246.1	TRAK1-003	3260	556aa	ENSP00000410717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58826	Q9UPV9	NM_001265610.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427771.1	TRAK1-007	900	300aa	ENSP00000413729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3T3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000418790.1	TRAK1-009	489	44aa	ENSP00000409940.1	Nonsense mediated decay		F8WDH2	-	-
ENST00000487159.1	TRAK1-006	5536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484786.1	TRAK1-005	2008	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469506.2	TRAK1-008	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,620 bps, Translation length: 686 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2695

Version

ENST00000341421.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317460 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000341421.3 TRAK1-002

Summary