Transcript: ENST00000318596.7 SLC25A42-001

Description

solute carrier family 25, member 42 [Source:HGNC Symbol;Acc:28380]

Gene Synonyms

MGC26694

Location

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 20693 variant alleles and maps to 513 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318596.7	SLC25A42-001	3120	318aa	ENSP00000326693.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32966	Q86VD7	NM_178526.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600275.1	SLC25A42-006	318	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000594070.1	SLC25A42-002	1228	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596819.1	SLC25A42-005	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000597661.1	SLC25A42-003	519	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600251.1	SLC25A42-004	414	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 3,120 bps, Translation length: 318 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86VD7

CCDS

This transcript is a member of the Human CCDS set: CCDS32966

Version

ENST00000318596.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000465931 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.