Transcript: ENST00000428565.1 CXCR2-005

Description

chemokine (C-X-C motif) receptor 2 [Source:HGNC Symbol;Acc:6027]

Gene Synonyms

CD182, CDw128b, CMKAR2, IL8R2, IL8RA, IL8RB

Location

Chromosome 2: 218,994,010-219,000,041 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 21 domains and features, is associated with 2606 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSG00000180871.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318507.2	CXCR2-001	2879	360aa	ENSP00000319635.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2408	C9J1J7 C9J2F9 C9JG19 C9JW47 P25025 Q53PC4	NM_001557.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453237.1	CXCR2-002	813	200aa	ENSP00000413686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1J7 C9J2F9 C9JG19 C9JW47	NM_001168298.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000428565.1	CXCR2-005	621	172aa	ENSP00000392698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1J7 C9J2F9 C9JG19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454148.1	CXCR2-004	597	135aa	ENSP00000415148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415392.1	CXCR2-007	585	138aa	ENSP00000392348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2F9 C9JG19	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449014.1	CXCR2-003	262	15aa	ENSP00000410506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418878.1	CXCR2-006	223	15aa	ENSP00000416815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 621 bps, Translation length: 172 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000428565.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338839 (version 1)

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Favourite species

All species

Recent locations

Transcript: ENST00000428565.1 CXCR2-005

Summary