Transcript: ENST00000439510.2 CDC42EP4-003

Description

CDC42 effector protein (Rho GTPase binding) 4 [Source:HGNC Symbol;Acc:17147]

Gene Synonyms

BORG4, CEP4, KAIA1777, MGC17125, MGC3740

Location

Chromosome 17: 71,279,764-71,308,132 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 14499 variant alleles and maps to 437 oligo probes.

Gene

This transcript is a product of gene ENSG00000179604.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335793.3	CDC42EP4-001	3272	356aa	ENSP00000338258.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11695	B2R6D8 J3KRZ9 J3QQS6 Q9H3Q1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439510.2	CDC42EP4-003	2879	286aa	ENSP00000404270.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KUS7	NM_012121.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580315.1	CDC42EP4-006	1022	127aa	ENSP00000462231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRZ9 J3QQS6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581014.1	CDC42EP4-009	737	79aa	ENSP00000464104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579611.1	CDC42EP4-004	580	73aa	ENSP00000463877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQS6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582303.1	CDC42EP4-008	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578516.1	CDC42EP4-005	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581045.1	CDC42EP4-007	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,879 bps, Translation length: 286 residues

Version

ENST00000439510.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000441899 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000439510.2 CDC42EP4-003

Summary