Transcript: ENST00000547922.1 SLC17A8-004

Description

solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:HGNC Symbol;Acc:20151]

Gene Synonyms

DFNA25, VGLUT3

Location

About this transcript

This transcript has 2 exons, is associated with 681 variant alleles and maps to 69 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323346.5	SLC17A8-001	3983	589aa	ENSP00000316909.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9077	Q8NDX2	NM_139319.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392989.3	SLC17A8-002	1737	539aa	ENSP00000376715.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44957	Q8NDX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552697.1	SLC17A8-003	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547922.1	SLC17A8-004	471	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 471 bps,

Version

ENST00000547922.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000408675 (version 1)