Transcript: ENST00000317216.2 EGR3-001

Description

early growth response 3 [Source:HGNC Symbol;Acc:3240]

Gene Synonyms

EGR-3, PILOT

Location

About this transcript

This transcript has 2 exons, is annotated with 20 domains and features, is associated with 3010 variant alleles and maps to 426 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317216.2	EGR3-001	4336	387aa	ENSP00000318057.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6033	B4DH80 Q06889	NM_004430.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522910.1	EGR3-003	1553	349aa	ENSP00000430310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56528	B4DH80 Q06889	NM_001199880.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519492.1	EGR3-002	1500	71aa	ENSP00000429370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524088.1	EGR3-004	1230	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518773.1	EGR3-005	505	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 4,336 bps, Translation length: 387 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06889

CCDS

This transcript is a member of the Human CCDS set: CCDS6033

Version

ENST00000317216.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000215098 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.