Transcript: ENST00000586280.1 FARSA-009

Description

phenylalanyl-tRNA synthetase, alpha subunit [Source:HGNC Symbol;Acc:3592]

Gene Synonyms

CML33, FARS, FARSL, FARSLA, FRSA, PheHA

Location

Chromosome 19: 13,039,224-13,044,456 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 2479 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSG00000179115.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000588025.1	FARSA-006	2057	548aa	ENSP00000468051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ER00	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000314606.4	FARSA-001	1814	508aa	ENSP00000320309.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12287	Q6IBR2 Q9Y285	NM_004461.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423140.2	FARSA-002	1720	477aa	ENSP00000396548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E363	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593021.1	FARSA-005	1135	378aa	ENSP00000467384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000587981.1	FARSA-007	521	168aa	ENSP00000465402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK06	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587488.1	FARSA-010	514	159aa	ENSP00000468384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586146.1	FARSA-004	1707	235aa	ENSP00000468068.1	Nonsense mediated decay		K7ER16	-	-
ENST00000588965.1	FARSA-003	1831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592662.1	FARSA-008	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586280.1	FARSA-009	803	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 803 bps,

Version

ENST00000586280.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451941 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000586280.1 FARSA-009

Summary