Transcript: ENST00000557138.1 C14orf39-003

Description

chromosome 14 open reading frame 39 [Source:HGNC Symbol;Acc:19849]

Gene Synonyms

SIX6OS1, Six6os1

Location

About this transcript

This transcript has 13 exons, is associated with 22156 variant alleles and maps to 380 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000321731.3	C14orf39-001	2813	587aa	ENSP00000324920.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9746	G3V3U9 G3V493 Q8N1H7	NM_174978.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556799.1	C14orf39-005	558	88aa	ENSP00000451441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3U9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555476.1	C14orf39-004	482	114aa	ENSP00000451665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V493	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557138.1	C14orf39-003	1497	37aa	ENSP00000450476.1	Nonsense mediated decay		G3V257	-	-
ENST00000498565.1	C14orf39-002	475	72aa	ENSP00000451937.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 3, Transcript length: 1,497 bps, Translation length: 37 residues

Version

ENST00000557138.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412188 (version 1)