Transcript: ENST00000449476.2 CTC1-002

Description

CTS telomere maintenance complex component 1 [Source:HGNC Symbol;Acc:26169]

Gene Synonyms

AAF-132, AAF132, C17orf68, CRMCC, FLJ22170, RP11-849F2.8, tmp494178

Location

Chromosome 17: 8,130,191-8,151,360 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 9 domains and features, is associated with 11206 variant alleles and maps to 1440 oligo probes.

Gene

This transcript is a product of gene ENSG00000178971.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315684.8	CTC1-001	4024	1217aa	ENSP00000313759.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42259	Q2NKJ3	NM_025099.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581729.1	CTC1-013	569	123aa	ENSP00000462720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580299.1	CTC1-012	375	125aa	ENSP00000462607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSR1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000449476.2	CTC1-002	4797	1031aa	ENSP00000396018.2	Nonsense mediated decay		Q2NKJ3	-	-
ENST00000578537.1	CTC1-009	943	134aa	ENSP00000463230.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000581671.1	CTC1-004	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578240.1	CTC1-003	1653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578441.1	CTC1-010	781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584439.1	CTC1-011	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581967.1	CTC1-008	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000579066.1	CTC1-006	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584842.1	CTC1-005	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583254.1	CTC1-007	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 20, Transcript length: 4,797 bps, Translation length: 1,031 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2NKJ3

Version

ENST00000449476.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000442011 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000449476.2 CTC1-002

Summary