Transcript: ENST00000484594.1 ERBB4-003

Description

v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 [Source:HGNC Symbol;Acc:3432]

Gene Synonyms

ALS19, HER4, p180erbB4

Location

Chromosome 2: 212,426,487-213,403,306 reverse strand.

About this transcript

This transcript has 20 exons, is associated with 457748 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSG00000178568.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000342788.4	ERBB4-001	12132	1308aa	ENSP00000342235.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2394	E9PDR1 Q15303 Q4ZG14 Q53QS8 Q53R25 Q53R48 Q53T57 Q580Q7	NM_005235.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436443.1	ERBB4-002	12084	1292aa	ENSP00000403204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42811	E9PDR1 Q15303 Q4ZG14 Q53QS8 Q53R25 Q53R48 Q580Q7	NM_001042599.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402597.1	ERBB4-201	3897	1298aa	ENSP00000385565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDR1 Q15303 Q4ZG14 Q53R25 Q53R48 Q53T57 Q580Q7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000260943.6	ERBB4-004	2194	731aa	ENSP00000260943.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDR1 Q53R48 Q580Q7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000435846.1	ERBB4-005	569	128aa	ENSP00000405564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDR1 Q53R48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484474.1	ERBB4-006	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463121.1	ERBB4-008	309	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484594.1	ERBB4-003	2680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459774.1	ERBB4-007	444	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 0, Transcript length: 2,680 bps,

Version

ENST00000484594.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336977 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000484594.1 ERBB4-003

Summary