Transcript: ENST00000534561.1 PNPLA2-005

Description

patatin-like phospholipase domain containing 2 [Source:HGNC Symbol;Acc:30802]

Gene Synonyms

1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, desnutrin, iPLA2zeta

Location

Chromosome 11: 821,774-822,258 forward strand.

About this transcript

This transcript has 2 exons, is associated with 323 variant alleles and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSG00000177666.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336615.4	PNPLA2-001	2428	504aa	ENSP00000337701.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7718	Q96AD5	NM_020376.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525250.1	PNPLA2-002	2726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529255.1	PNPLA2-003	1301	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531923.1	PNPLA2-007	637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526083.1	PNPLA2-006	465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534561.1	PNPLA2-005	388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 388 bps,

Version

ENST00000534561.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382854 (version 1)

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Transcript: ENST00000534561.1 PNPLA2-005

Summary