Transcript: ENST00000558180.2 IRX3-002

Description

iroquois homeobox 3 [Source:HGNC Symbol;Acc:14360]

Gene Synonyms

IRX-1, IRXB1

Location

About this transcript

This transcript has 2 exons, is associated with 2007 variant alleles and maps to 258 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329734.3	IRX3-001	2601	501aa	ENSP00000331608.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10750	P78415	NM_024336.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558054.1	IRX3-003	444	84aa	ENSP00000463991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558180.2	IRX3-002	1540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,540 bps,

Version

ENST00000558180.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417411 (version 3)