Transcript: ENST00000399849.3 HIC1-006

Description

hypermethylated in cancer 1 [Source:HGNC Symbol;Acc:4909]

Gene Synonyms

ZBTB29, ZNF901, hic-1

Location

Chromosome 17: 1,958,393-1,962,981 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 43 domains and features, is associated with 3285 variant alleles and maps to 411 oligo probes.

Gene

This transcript is a product of gene ENSG00000177374.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399849.3	HIC1-006	3157	714aa	ENSP00000382742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42230	I3L388 K7ENQ1 O95459 Q14526	NM_006497.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322941.3	HIC1-005	3053	733aa	ENSP00000314080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42229	I3L388 K7ENQ1 O95459 Q14526	NM_001098202.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000574370.1	HIC1-001	1134	9aa	ENSP00000461476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571875.2	HIC1-002	812	66aa	ENSP00000476554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576444.1	HIC1-004	725	84aa	ENSP00000467045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENQ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571990.1	HIC1-003	654	96aa	ENSP00000460268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L388 K7ENQ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,157 bps, Translation length: 714 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14526

CCDS

This transcript is a member of the Human CCDS set: CCDS42230

Version

ENST00000399849.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000438877 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000399849.3 HIC1-006

Summary