Transcript: ENST00000395172.1 C8orf31-003

Description

chromosome 8 open reading frame 31 [Source:HGNC Symbol;Acc:26731]

Gene Synonyms

FLJ37131

Location

About this transcript

This transcript has 6 exons, is associated with 6888 variant alleles and maps to 302 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395172.1	C8orf31-003	1875	132aa	ENSP00000378601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6395	Q8N9H6	NM_173687.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524181.1	C8orf31-002	1199	62aa	ENSP00000427838.1	Nonsense mediated decay		Q8N9H6	-	-
ENST00000517653.1	C8orf31-001	1554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519775.1	C8orf31-006	791	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523099.1	C8orf31-005	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523766.1	C8orf31-004	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520786.1	C8orf31-007	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,875 bps, Translation length: 132 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N9H6

CCDS

This transcript is a member of the Human CCDS set: CCDS6395

Version

ENST00000395172.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000380167 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.