Transcript: ENST00000560160.1 SIX5-003

Description

SIX homeobox 5 [Source:HGNC Symbol;Acc:10891]

Gene Synonyms

BOR2, DMAHP

Location

About this transcript

This transcript has 2 exons, is annotated with 10 domains and features, is associated with 2904 variant alleles and maps to 277 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317578.6	SIX5-001	3318	739aa	ENSP00000316842.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12673	Q8N196	NM_175875.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560168.1	SIX5-004	1975	69aa	ENSP00000453189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLF6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560160.1	SIX5-003	1809	255aa	ENSP00000453239.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,809 bps, Translation length: 255 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000560160.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417342 (version 2)