Transcript: ENST00000524827.1 CSTF3-007

Description

cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa [Source:HGNC Symbol;Acc:2485]

Gene Synonyms

CSTF-77, CstF-77

Location

Chromosome 11: 33,127,425-33,183,006 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 22341 variant alleles and maps to 316 oligo probes.

Gene

This transcript is a product of gene ENSG00000176102.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323959.4	CSTF3-001	2797	717aa	ENSP00000315791.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7883	E9PJ06 Q12996	NM_001326.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438862.2	CSTF3-002	1132	103aa	ENSP00000388711.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44563	E9PJ06 Q12996	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431742.2	CSTF3-003	715	44aa	ENSP00000393064.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44564	Q12996	NM_001033506.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524827.1	CSTF3-007	693	185aa	ENSP00000431355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524775.1	CSTF3-004	434	61aa	ENSP00000431903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ06	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528865.1	CSTF3-005	592	91aa	ENSP00000435138.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524556.1	CSTF3-008	558	52aa	ENSP00000434753.1	Nonsense mediated decay		E9PNK2	-	-
ENST00000526480.1	CSTF3-006	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 693 bps, Translation length: 185 residues

Version

ENST00000524827.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388802 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000524827.1 CSTF3-007

Summary