Transcript: ENST00000517439.1 TMEM70-004

Description

transmembrane protein 70 [Source:HGNC Symbol;Acc:26050]

Gene Synonyms

FLJ20533, MC5DN2

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 2626 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312184.5	TMEM70-001	2018	260aa	ENSP00000312599.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6215	L0R5D5 Q9BUB7	NM_017866.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517439.1	TMEM70-004	617	107aa	ENSP00000429467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47876	E9PDY9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416961.2	TMEM70-002	928	111aa	ENSP00000407695.2	Nonsense mediated decay		D4PHA6	-	-
ENST00000523794.1	TMEM70-006	761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520167.1	TMEM70-007	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517614.1	TMEM70-003	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519551.1	TMEM70-005	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 617 bps, Translation length: 107 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47876

Version

ENST00000517439.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000379027 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.