Transcript: ENST00000533626.1 EIF3F-001

Description

eukaryotic translation initiation factor 3, subunit F [Source:HGNC Symbol;Acc:3275]

Gene Synonyms

EIF3S5, eIF3-epsilon, eIF3-p47, eIF3f

Location

Chromosome 11: 7,991,798-8,023,409 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 15043 variant alleles and maps to 958 oligo probes.

Gene

This transcript is a product of gene ENSG00000175390.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000533626.1	EIF3F-001	7540	357aa	ENSP00000431800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7785	B4DEW9 O00303	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537635.1	EIF3F-203	1684	372aa	ENSP00000442283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSH1 B4DEW9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000309828.4	EIF3F-201	1254	357aa	ENSP00000310040.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7785	B4DEW9 O00303	NM_003754.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449102.2	EIF3F-202	1068	208aa	ENSP00000396929.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEW9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531572.1	EIF3F-009	485	100aa	ENSP00000434286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YDT6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000531329.1	EIF3F-004	1072	124aa	ENSP00000432489.1	Nonsense mediated decay		E9PQV8	-	-
ENST00000530219.1	EIF3F-005	2110	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528653.1	EIF3F-006	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528763.1	EIF3F-008	609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532882.1	EIF3F-007	454	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 7,540 bps, Translation length: 357 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00303

CCDS

This transcript is a member of the Human CCDS set: CCDS7785

Version

ENST00000533626.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000385713 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000533626.1 EIF3F-001

Summary