Transcript: ENST00000312175.2 BANF1-001

Description

barrier to autointegration factor 1 [Source:HGNC Symbol;Acc:17397]

Gene Synonyms

BAF, BCRG1, BCRP1, D14S1460, NGPS

Location

Chromosome 11: 65,769,550-65,771,620 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 1269 variant alleles and maps to 382 oligo probes.

Gene

This transcript is a product of gene ENSG00000175334.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312175.2	BANF1-001	1155	89aa	ENSP00000310275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8125	E9PJJ8 O75531	NM_003860.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533166.1	BANF1-004	1135	89aa	ENSP00000433760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8125	E9PJJ8 O75531	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445560.2	BANF1-002	946	89aa	ENSP00000416128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8125	E9PJJ8 O75531	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527348.1	BANF1-005	670	89aa	ENSP00000432867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8125	E9PJJ8 O75531	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530204.1	BANF1-003	586	28aa	ENSP00000431785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524628.1	BANF1-008	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528648.1	BANF1-006	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524663.1	BANF1-007	251	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,155 bps, Translation length: 89 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75531

CCDS

This transcript is a member of the Human CCDS set: CCDS8125

Version

ENST00000312175.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000391340 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000312175.2 BANF1-001

Summary