Transcript: ENST00000361727.3 CNTNAP2-001

Description

contactin associated protein-like 2 [Source:HGNC Symbol;Acc:13830]

Gene Synonyms

AUTS15, CASPR2, CDFE, Caspr2, KIAA0868, NRXN4, PTHSL1

Location

About this transcript

This transcript has 24 exons, is annotated with 47 domains and features, is associated with 1093478 variant alleles and maps to 930 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361727.3	CNTNAP2-001	9894	1331aa	ENSP00000354778.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5889	B7Z1Y6 O75852 Q75LG9 Q75M92 Q75MA1 Q75MD4 Q75MF6 Q75MF8 Q75MQ9 Q86UI8 Q86UJ1 Q86UL4 Q86UL6 Q86UL9 Q96T77 Q9UDV4 Q9UHC6	NM_014141.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538075.1	CNTNAP2-201	1944	390aa	ENSP00000440732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z1Y6 Q75M92 Q86UJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455301.1	CNTNAP2-002	556	185aa	ENSP00000392208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y4J0 Q75MA1 Q86UI8 Q86UL6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000463592.2	CNTNAP2-003	6065	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602734.1	CNTNAP2-004	1749	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 9,894 bps, Translation length: 1,331 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHC6

CCDS

This transcript is a member of the Human CCDS set: CCDS5889

Version

ENST00000361727.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000327668 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.