Transcript: ENST00000568875.1 SNAPC5-002

Description

small nuclear RNA activating complex, polypeptide 5, 19kDa [Source:HGNC Symbol;Acc:15484]

Gene Synonyms

SNAP19

Location

Chromosome 15: 66,785,806-66,790,118 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 2182 variant alleles and maps to 334 oligo probes.

Gene

This transcript is a product of gene ENSG00000174446.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316634.5	SNAPC5-001	1002	98aa	ENSP00000319597.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10217	O75971	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563480.2	SNAPC5-006	920	98aa	ENSP00000457892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10217	O75971	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307979.7	SNAPC5-003	794	68aa	ENSP00000308439.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75971	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395589.2	SNAPC5-008	749	98aa	ENSP00000378954.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10217	O75971	NM_006049.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566658.1	SNAPC5-009	574	67aa	ENSP00000456716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSI3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568875.1	SNAPC5-002	1741	83aa	ENSP00000455680.1	Nonsense mediated decay		H3BQA0	-	-
ENST00000565465.1	SNAPC5-005	1069	67aa	ENSP00000455626.1	Nonsense mediated decay		H3BSI3	-	-
ENST00000562411.1	SNAPC5-007	587	98aa	ENSP00000454421.1	Nonsense mediated decay	CCDS10217	O75971	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,741 bps, Translation length: 83 residues

Version

ENST00000568875.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420728 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000568875.1 SNAPC5-002

Summary