Transcript: ENST00000535664.1 MSRB3-003

Description

methionine sulfoxide reductase B3 [Source:HGNC Symbol;Acc:27375]

Gene Synonyms

DFNB74, DKFZp686C1178, FLJ36866

Location

Chromosome 12: 65,672,522-65,857,169 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 75623 variant alleles and maps to 290 oligo probes.

Gene

This transcript is a product of gene ENSG00000174099.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355192.3	MSRB3-001	4289	192aa	ENSP00000347324.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8973	Q6MZU8 Q8IXL7	NM_198080.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308259.5	MSRB3-002	4417	185aa	ENSP00000312274.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31853	F5H199 F5H7C4 Q6MZU8 Q8IXL7	NM_001193460.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535664.1	MSRB3-003	964	185aa	ENSP00000441650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31853	F5H199 F5H7C4 Q6MZU8 Q8IXL7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540804.1	MSRB3-008	884	160aa	ENSP00000437623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6G9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535239.1	MSRB3-004	630	164aa	ENSP00000445843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H199 F5H7C4	NM_001193461.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541189.1	MSRB3-011	528	174aa	ENSP00000440722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538045.1	MSRB3-005	527	117aa	ENSP00000442620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7C4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446731.2	MSRB3-010	506	117aa	ENSP00000404903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000541897.1	MSRB3-007	489	44aa	ENSP00000445051.1	Nonsense mediated decay		F5H4C9	-	-
ENST00000538725.1	MSRB3-006	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535143.1	MSRB3-009	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 964 bps, Translation length: 185 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IXL7

CCDS

This transcript is a member of the Human CCDS set: CCDS31853

Version

ENST00000535664.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000401426 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000535664.1 MSRB3-003

Summary