Transcript: ENST00000310942.4 CBX2-001

Description

chromobox homolog 2 [Source:HGNC Symbol;Acc:1552]

Gene Synonyms

CDCA6, M33, MGC10561, SRXY5

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 6563 variant alleles and maps to 370 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310942.4	CBX2-001	4644	532aa	ENSP00000308750.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32757	Q14781	NM_005189.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000269399.5	CBX2-002	1061	211aa	ENSP00000269399.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11764	Q14781	NM_032647.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571484.1	CBX2-003	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,644 bps, Translation length: 532 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14781

CCDS

This transcript is a member of the Human CCDS set: CCDS32757

Version

ENST00000310942.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000437040 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.