Transcript: ENST00000480519.1 ARV1-002

Description

ARV1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29561]

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 8793 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310256.2	ARV1-001	1335	271aa	ENSP00000312458.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1589	Q9H2C2	NM_022786.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366658.2	ARV1-003	1170	231aa	ENSP00000355618.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450711.1	ARV1-007	991	268aa	ENSP00000416039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000435927.1	ARV1-005	879	291aa	ENSP00000394547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480519.1	ARV1-002	1037	247aa	ENSP00000436763.1	Nonsense mediated decay		F6QB42	-	-
ENST00000459891.1	ARV1-006	1009	122aa	ENSP00000435420.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497753.1	ARV1-004	1072	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,037 bps, Translation length: 247 residues

Version

ENST00000480519.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000092639 (version 3)