Transcript: ENST00000308497.4 STOX2-001

Description

storkhead box 2 [Source:HGNC Symbol;Acc:25450]

Gene Synonyms

DKFZp762K222, KIAA1392

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 50182 variant alleles and maps to 580 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308497.4	STOX2-001	10458	926aa	ENSP00000311257.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47167	D6RDA5 Q9P2F5	NM_020225.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438269.1	STOX2-201	4027	863aa	ENSP00000390127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDA5 Q9P2F5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512520.1	STOX2-003	518	155aa	ENSP00000425388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513034.1	STOX2-004	443	74aa	ENSP00000422118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000506529.1	STOX2-002	1055	219aa	ENSP00000426209.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511250.1	STOX2-005	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 10,458 bps, Translation length: 926 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P2F5

CCDS

This transcript is a member of the Human CCDS set: CCDS47167

Version

ENST00000308497.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000361433 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.