Transcript: ENST00000393650.3 IQCB1-002

Description

IQ motif containing B1 [Source:HGNC Symbol;Acc:28949]

Gene Synonyms

KIAA0036, NPHP5, PIQ, SLSN5

Location

Chromosome 3: 121,488,841-121,553,926 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 4 domains and features, is associated with 26440 variant alleles and maps to 499 oligo probes.

Gene

This transcript is a product of gene ENSG00000173226.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310864.6	IQCB1-001	2594	598aa	ENSP00000311505.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33837	C9J6Z7 C9JVC4 C9JXD7 Q15051	NM_001023570.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349820.6	IQCB1-003	1919	465aa	ENSP00000323756.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33836	C9JVC4 Q15051	NM_001023571.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460108.1	IQCB1-005	988	143aa	ENSP00000419168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6Z7 C9JXD7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498104.1	IQCB1-006	701	84aa	ENSP00000417832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6Z7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462442.1	IQCB1-004	602	87aa	ENSP00000419376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JVC4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000393650.3	IQCB1-002	2253	303aa	ENSP00000377261.3	Nonsense mediated decay		C9J6Z7 C9JVC4 Q15051	-	-
ENST00000471726.1	IQCB1-007	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 8, Transcript length: 2,253 bps, Translation length: 303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15051

Version

ENST00000393650.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250574 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000393650.3 IQCB1-002

Summary