Transcript: ENST00000416195.1 SP3-002

Description

Sp3 transcription factor [Source:HGNC Symbol;Acc:11208]

Gene Synonyms

SPR-2, SPR2

Location

Chromosome 2: 174,773,258-174,829,281 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 27871 variant alleles and maps to 426 oligo probes.

Gene

This transcript is a product of gene ENSG00000172845.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310015.6	SP3-001	6359	781aa	ENSP00000310301.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2254	H0Y6K5 Q02447 Q68DP2	NM_003111.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455789.2	SP3-201	6236	728aa	ENSP00000388903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q02447 Q68DP2 Q8TE45	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418194.2	SP3-003	3937	713aa	ENSP00000406140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46452	H0Y6K5 Q68DP2	NM_001017371.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416195.1	SP3-002	3627	738aa	ENSP00000413665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DP2 Q8TE45	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483084.1	SP3-005	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462904.1	SP3-007	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490182.1	SP3-008	459	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465379.1	SP3-004	5489	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,627 bps, Translation length: 738 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000416195.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000333997 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000416195.1 SP3-002

Summary