Transcript: ENST00000306149.7 CSDC2-001

Description

cold shock domain containing C2, RNA binding [Source:HGNC Symbol;Acc:30359]

Gene Synonyms

PIPPIN, PIPPin, dJ347H13.2

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 7751 variant alleles and maps to 390 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306149.7	CSDC2-001	2777	153aa	ENSP00000302485.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14019	Q9Y534	NM_014460.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460790.1	CSDC2-003	721	151aa	ENSP00000417127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4E7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,777 bps, Translation length: 153 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y534

CCDS

This transcript is a member of the Human CCDS set: CCDS14019

Version

ENST00000306149.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320689 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.