Transcript: ENST00000479258.1 REG1B-003

Description

regenerating islet-derived 1 beta [Source:HGNC Symbol;Acc:9952]

Gene Synonyms

PSPS2, REGH, REGI-BETA, REGL

Location

About this transcript

This transcript has 4 exons, is associated with 1553 variant alleles and maps to 370 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305089.3	REG1B-001	767	166aa	ENSP00000303206.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1963	P48304 Q6ICS1	NM_006507.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454188.1	REG1B-005	626	149aa	ENSP00000387410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZ24	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479258.1	REG1B-003	1255	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476554.1	REG1B-002	1225	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469052.1	REG1B-004	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,255 bps,

Version

ENST00000479258.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328251 (version 1)